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Easy editing of Protein Data Bank formatted files withEMACS

Charles S. Bond2003-03-15Journal of Applied Crystallography

A protein crystallographer typically spends a large proportion of time manipulating Protein Data Bank (PDB) formatted coordinate files. Of the many situations where such coordinate data must be altered for a particular purpose, a combination of a simple text editor and a number of programs is required. pdb-mode for EM…

Protein Structure and DynamicsAdvanced Proteomics Techniques and ApplicationsEnzyme Structure and Function

77Se NMR Evidence for the Development of Antiferromagnetic Spin Fluctuations of π-Electrons in λ-(BETS)2GaCl4

Shigeru Takagi、Daisuke Maruta、H. Sasaki 等 11 位作者2003-03-15Journal of the Physical Society of Japan

The microscopic magnetic properties of superconducting (T<sub>c</sub> ≅ 6 K) λ-(BETS)<sub>2</sub>GaCl<sub>4</sub> (BETS = bis(ethylenedithio)tetraselenafulvalene) have been investigated by <sup>77</sup>Se NMR in the normal state between 7.1 and 100 K on randomly oriented single crystals with κ-(BETS)<sub>2</sub>GaCl<s…

Perovskite Materials and ApplicationsMagnetism in coordination complexesOrganic and Molecular Conductors Research

Zr4O5N2 − Intergrowth of Fluorite and Bixbyite Anion Layers Formed by Coupled Site-Selective Anion and Vacancy Ordering

Charles W. Michie、John B. Claridge、Simon J. Clarke 等 4 位作者2003-03-15Chemistry of Materials

The defect fluorite Zr 4 O 5 N 2 is presented. A simple layered intergrowth of the important bixbyite and fluorite structure types, it displays an A 4 X 7 vacancy ordering alternative to that in the pyrochlore and other structures. This ordering is stabilized by proximity of the highly charged N 3 - anions to the bixb…

Nuclear materials and radiation effectsChemical Synthesis and CharacterizationInorganic Chemistry and Materials

Deconvolution of instrumental aberrations for synchrotron powder X-ray diffractometry

Takashi Ida、H. Hibino、H. Toraya2003-03-15Journal of Applied Crystallography

A method to remove the effects of instrumental aberrations from the whole powder diffraction pattern measured with a high-resolution synchrotron powder diffractometer is presented. Two types of asymmetry in the peak profiles caused by (i) the axial-divergence aberration of the diffractometer (diffractometer aberration…

High-pressure geophysics and materialsNuclear Physics and ApplicationsX-ray Diffraction in Crystallography

Roles of Excess Atoms in Electronic and Magnetic Properties of Fe2+xV1-xZ (Z = Al, Ga)

Shinpei Fujii、Youichi Ienaga、Shoji Ishida 等 4 位作者2003-03-15Journal of the Physical Society of Japan

To expand our knowledge of Fe 2+ x V 1- x Z (Z = Al, Ga), band calculations (LMTO-ASA) have been performed for several x values ( x =0, ±0.125, ±0.25) with a supercell method. Obtained density of states and magnetic moments indicate that excess atoms, which are introduced instead of the original Fe or V atom in Fe 2 V…

Semiconductor materials and interfacesHeusler alloys: electronic and magnetic properties

Neutron Structural analysis of La1-xSrxMnO3–Variation of One-Electron BandwidthWwith Hole Doping–

Sheng Xu、Yutaka Moritomo、Kenji Ohoyama 等 4 位作者2003-03-15Journal of the Physical Society of Japan

We have performed neutron powder diffraction measurements for La 1- x Sr x MnO 3 ( x =0.00–0.20) at room temperature. We have found that the crystal structure is orthorhombic ( Pbnm , Z =4; O) at x ≤0.14 and rhombohedral ( R \bar3 c , Z =2; R) at x ≥0.18, respectively. At this structural phase transition, the averaged…

Magnetic and transport properties of perovskites and related materialsRare-earth and actinide compoundsAdvanced Condensed Matter Physics

Recrystallization During and Following Hot Working of Magnesium Alloy AZ31

Matthew Barnett2003-03-15Materials science forum

\n\t\t\t\t\tThe microstructures of magnesium AZ31 are examined following hot compression testing and annealing. The grain size, fraction dynamically recrystallized and, in a couple of cases, the crystallographic texture are reported. It was found that the progress of dynamic recrystallization is strongly sensitive to…

Magnesium Alloys: Properties and ApplicationsAluminum Alloy Microstructure PropertiesAluminum Alloys Composites Properties

Structural refinements of the individual grains within polycrystals and powders

S. Schmidt、Henning Friis Poulsen、G. Vaughan2003-03-15Journal of Applied Crystallography

A method is presented for simultaneous structural refinement of up to several hundred grains inside powders or polycrystals. The method is based on the use of hard X-rays and the indexing program GRAINDEX , where grain orientations are found by scanning in Euler space. Conventional experimental setups and refinement p…

Advanced ceramic materials synthesisAdvanced materials and compositesX-ray Diffraction in Crystallography

Application of a Stirring Method to Micro-Scale and Vapor Diffusion Protein Crystallization

Hiroaki Adachi、Kazufumi Takano、Masashi Yoshimura 等 5 位作者2003-03-15Japanese Journal of Applied Physics

A new method of protein crystallization, the "Micro-stirring" technique, has been developed. The method combines the traditional vapor diffusion technique and a stirring method. Stirring the protein solution prevents excess spontaneous nucleation and promotes larger crystals. This innovative method, Micro-stirring, is…

Protein Structure and DynamicsEnzyme Structure and FunctionCrystallization and Solubility Studies

First-Principles Studies of Antiferromagnetic MnO and NiO Surfaces

Hiroyoshi Momida、Tamio Oguchi2003-03-15Journal of the Physical Society of Japan

Surface properties of antiferromagnetic MnO(001) and NiO(001) are investigated by means of first-principles electronic structure calculations. It is shown that the surface O sites have finite spin magnetic moments of 0.04 µ B and 0.07 µ B for MnO and NiO surfaces, respectively. Because of non-zero energy gap even at t…

Magnetic properties of thin filmsZnO doping and propertiesMagnetic and transport properties of perovskites and related materials

Automated profile analysis for single-crystal diffraction data

R. J. Angel2003-03-15Journal of Applied Crystallography

An integration method for step-scanned single-crystal intensity data based upon fitting of the individual diffraction profiles by a pseudo-Voigt function is presented. Algorithms for both the recovery of weak intensities from data sets and the rejection of aberrant peak profiles are discussed. The ideas presented in t…

Enzyme Structure and FunctionMachine Learning in Materials ScienceX-ray Diffraction in Crystallography

In-Plane Orientation and Polarity of ZnO Epitaxial Films on As-Polished Sapphire (α-Al2O3) (0001) Substrates Grown by Metal Organic Chemical Vapor Deposition

Baoping Zhang、Le-hong Manh、Katsuki Wakatsuki 等 10 位作者2003-03-15Japanese Journal of Applied Physics

In-Plane Orientation and Polarity of ZnO Epitaxial Films on As-Polished Sapphire (α-Al2O3) (0001) Substrates Grown by Metal Organic Chemical Vapor Deposition, Zhang, Bao-ping, Manh, Le-hong, Wakatsuki, Katsuki, Tamura, Kentaro, Ohnishi, Tsuyoshi, Lippmaa, Mikk, Usami, Noritaka, Kawasaki, Masashi, Koinuma, Hideomi, Seg…

ZnO doping and propertiesCopper-based nanomaterials and applicationsGa2O3 and related materials

High Pressure Raman Study of KNbO3–KTaO3and KNbO3–NaNbO3Mixed Crystals

Mirza Shamim、Takeo Ishidate、Kikuo Ohi2003-03-15Journal of the Physical Society of Japan

High pressure Raman spectra of KNbO 3 –KTaO 3 (KTN) and –NaNbO 3 (KNN) mixed crystals have been measured to study the behavior of the anomalous mode coupling as well as the phase transition and analyzed on the basis of the two-mode coupling model. The anomalous mode coupling has been observed for all samples under pre…

Ferroelectric and Piezoelectric MaterialsPhotorefractive and Nonlinear OpticsAcoustic Wave Resonator Technologies

HRTEM Observation of the Precipitates in Mg-Gd-Y-Zr Alloy

Tokimasa Kawabata、Kenji Matsuda、S. Kamado 等 5 位作者2003-03-15Materials science forum

The high resolution transmission electron microscope (HRTEM) observation was carried out to investigate the microstructure of precipitates in a Mg-Gd-Y-Zr alloy. The b{sup ''} and b' phases have co-existed in the peak-aged specimen, and the morphology of their phases was expected as the needle. The interface between t…

Magnesium Alloys: Properties and ApplicationsHydrogen Storage and MaterialsMetallurgical and Alloy Processes

Porous Bioresorbable Magnesium as Bone Substitute

Cuié Wen、Yasuo Yamada、Koji Shimojima 等 6 位作者2003-03-15Materials science forum

\n\t\t\t\t\tRecently magnesium has been recognized as a very promising biomaterial for bone substitutes because of its excellent properties of biocompatibility, biodegradability and bioresorbability. In the present study, magnesium foams were fabricated by using a powder metallurgical process. Scanning electron micros…

Bone Tissue Engineering MaterialsMagnesium Alloys: Properties and ApplicationsCellular and Composite Structures

A New Route to Alumoxane Gel: A Versatile Precursor to γ-Alumina and Alumina-Based Ceramic Oxides

Kurikka V. P. M. Shafi、Abraham Ulman、Jriuan Lai 等 5 位作者2003-03-15Journal of the American Chemical Society

We present a new route for the preparation of gamma-alumina and YAG nanoparticles. Metal salts of ethylhexanoic acids provide good solubility in hydrocarbon solvents and allow efficient ultrasonication. The sonication product is an alumioxane gel, which can reversibly collapse and reform, depending on the solvent used…

Advanced ceramic materials synthesisThermal and Kinetic AnalysisMagnesium Oxide Properties and Applications

Effect of Soluble and Insoluble Zirconium on the Grain Refinement of Magnesium Alloys

Ma Qian、David H. StJohn、M. T. Frost2003-03-15Materials science forum

Wet chemical analyses of well-mixed fine drillings from a zirconium alloyed magnesium ingot showed that the resultant "soluble zirconium" was a function of the concentration of the hydrochloric or nitric acid that was used to digest the samples while the total zirconium could be readily and accurately determined. A so…

Magnesium Alloys: Properties and ApplicationsAluminum Alloy Microstructure PropertiesAluminum Alloys Composites Properties

Novel Routes to Cu(salicylaldimine) Covalently Bound to Silica: Combined Pulse EPR and in Situ Attenuated Total Reflection-IR Studies of the Immobilization

Eamonn F. Murphy、Davide Ferri、Alfons Baiker 等 5 位作者2003-03-15Inorganic Chemistry

Several novel routes for the immobilization of modified Cu(salicylaldimine) complexes on commercially available silica are described. New pulse electron paramagnetic resonance (EPR) and electron-nuclear double resonance sequences, which provide more detailed information than that available previously, in combination w…

Mesoporous Materials and CatalysisPorphyrin and Phthalocyanine ChemistryOxidative Organic Chemistry Reactions

A procedure for setting up high-throughput nanolitre crystallization experiments. I. Protocol design and validation

Thomas S. Walter、J. Diprose、James Brown 等 7 位作者2003-03-15Journal of Applied Crystallography

A protocol for setting up nanolitre sitting-drop vapour-diffusion experiments is reported. The procedure uses standard crystallization screening kits and 96-well crystallization plates. Reservoir solutions are transferred from 96-deep-well blocks to crystallization plates in a single step with a Robbins-Hydra pipettor…

Protein purification and stabilityEnzyme Structure and FunctionCrystallization and Solubility Studies

Effect of Yb Addition on the Sintering Behavior and High Power Piezoelectric Properties of Pb(Zr,Ti)O3–Pb(Mn,Nb)O3

Jungho Ryu、Hyeoung Woo Kim、Kenji Uchino 等 4 位作者2003-03-15Japanese Journal of Applied Physics

0.9Pb(Zr 0.61 Ti 0.39 )–0.1Pb(Mn 1/3 Nb 2/3 )O 3 piezoelectric ceramics doped with Yb 2 O 3 were prepared by conventional ceramic processing, and the effects of the Yb doping on the sintering behavior and high power piezoelectric properties were investigated. X-ray diffractomer (XRD) measurements indicated that the pi…

Ferroelectric and Piezoelectric MaterialsAcoustic Wave Resonator TechnologiesDielectric materials and actuators