Materials Literature
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Additional file 3: Table S1. Hydrodynamic nanoparticle size measured with dynamic light scattering. Mean hydrodynamic size of VSOP doped with Europium (9.9 to 12.0 nm) is similar to that of nondoped VSOP (10.8 ± 2.8 nm), and there is a narrow distribution of mean diameters (PdI), confirming homogeneity of the synthesi…
Table S2. Accuracy of models reconstructed using CONFOLD for the 150 proteins in the PSICOV data set using (a) predicted contacts and (b) contacts and non-contacts and non-contacts. Top-L predicted contacts were considered for all tasks and best-of-20 models are evaluated. For selecting non-contacts confidence thresho…
FASTA sequences of CSL proteins used for the phylogenetic analysis. (PDF 453 kb)
Structural evaluation of the 3D models of AtPAE4, AtPAE8 and AtPAE10 using Ramachandran plot analysis. Each model was compared to the template 4UYU (in dark green). The Ramachandran plot was visualized using Pymol [77]. The 3D models of AtPAE4, AtPAE8 and AtPAE10 are in red, blue and olive, respectively. The square an…
KEGG graph of porphyrin and chlorophyll metabolism pathway (CG-vs-ETH). 1.16.3.1 indicates ferretin 1 (evm.TU.supercontig_5.220); 2.5.1.61 indicates hydroxymethylbilane synthase (evm.TU.supercontig_43.43); 1.3.3.4 indicates protoporphyrinogen oxidase (evm.TU.supercontig_130.4); 6.6.1.1 indicates magnesium-chelatase su…
Mapping of known permissive sites within TpiA and Bla. A known permissive site (first column, given as residue number) within TpiA and Bla [32] was assigned to a predicted stretch (PS) if it mapped directly within a PS (see Additional file 3: Figure S1 for illustration) or if it was shifted by few residues but at leas…
Configuration of laser pumping and UC measurement in JASCO FP-6500 sample chamber. Figure S2. UC luminescence comparison of (La,RE,Yb)2O2S and (La,RE)2O2S under the excitation of 978-nm laser. Table S1. CIE chromaticity coordinates of the (La0.97Ho0.01Yb0.02)2O2S UC phosphor under different excitation power. Figure S3…
Additional file 5. Growth of the MTLcuaD complemented strain on arabinose. The data shows the growth of WT, MTLcuaD, MTLcuaD(pSOSzero-Tm), MTLcuaD(pSOScbpA), MTLcuaD(pSOScuaABC), MTLcuaD(pSOScuaABC-cbpA) strains on minimal medium containing 2 g.L−1 arabinose.
Additional file 2. Generated structures. Structures generated by the canonical Prior and different Agents.
The morphological changes of ovaries following hormone and inhibitor treatments. (A-C) The morphological changes observed following the 20E, 30% alcohol and RH-5992 treatments, respectively. (D-G) The morphological changes in the DMSO control and various inhibitors of insulin pathways, LY294002, U0126 and Rapamycin, r…
Additional file 3. Comparison of cua genes expression level between WT and MTLcuaD mutant strain grown on arabinose. qPCR was performed on cDNA prepared on total RNA extracted from cultures of R. cellulolyticum WT and MTLcuaD strains grown on minimal medium containing 2 g.L−1 arabinose. Expression of each gene of the…
Facile synthesis of colored and conducting CuSCN composite coated with CuS nanoparticles. Figure S1. XRD and EDX spectra of CuS-coated TiO2. Figure S2. CuS-coated CuSCN composite before and after sonication in water. Figure S3. Resistance value of thin film prepared from CuS-coated CuSCN (adding 10 ml of THT), before…
The statistics of transcription factors. (A) The classification of TFs. (B) TF families with the top 10 numbers. (PDF 301 kb)
Additional file 3: Table S1. Ratio of individual CPs to total amount of CPs.
Annotation of the Epicauta tibialis mitogenome. (DOCX 21 kb)
Additional file 1. Mass spectrogram of polypeptides. a Mass spectrogram of the unmodified polypeptides. b Mass spectrogram of the FITC-modified polypeptides.
Additional file 1: Figure S1. Time series for a selection of MD simulations used to calibrate the CYP 1A2 (left panels), FXR (middle panels) and JAK2 LIE models (right panels): Coulomb (blue) and van der Waals (violet) interaction energies (V) between the ligand and its environment (upper three rows); and protein (bac…
Additional file 1. Explanatory variables.
A part of a multiple sequence alignment of proteins belonging to the COG3002 (uncharacterized conserved protein YbcC, UPF0753/DUF2309 family). Only conserved blocks' regions with at least 95% conserved charged residues are shown (see the scheme below for their coordinates in the YbcC protein from Bacillus subtilis). S…
Flux towards amino acid biosynthesis in phases G1, G2, G3 and G4 of the pfkA-mutant. arcA: arginine deiminase, lysA: diaminopimelate decarboxylase, ilvE: branched-chain-amino-acid aminotransferase, trpA: tryptophan synthase, tat: tyrosine aminotransferase, glyA: serine hydroxymethyltransferase, alaT: alanine aminotran…