MOESM1 of Scoria: a Python module for manipulating 3D molecular data
Additional file 1: Table S1. Main Scoria functions, with associated dependencies (if any).
Materials Literature
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Additional file 1: Table S1. Main Scoria functions, with associated dependencies (if any).
Inflammation parameters in blood and BALF after challenge with placebo or 10 μg nanoparticles. Values are expressed as median with minimum and maximums values. Analysis was performed with non-parametric Mann - Whitney test, after correction for baseline values. Definition of abbreviations: NP: nanoparticles, CRP: C-re…
Flux towards amino acid biosynthesis in phases F1, F2, F3, F4 and F5 of the pfkA-mutant. (PDF 265 kb)
Additional file 1. Figure S1: Validation of anti-EGFR-antibody conjugation to SPIO nanoparticles using dot-blot assay. Figure S2: Measure the diameter of nanoparticles by TEM images. Figure S3: Characterization of iron oxide nanoparticles in physiological conditions.
TEM images of silica aerogel with disordered pores. Figure S2. N2 adsorption − desorption isotherms and the corresponding BJH pore size distribution of SA. Table S1. BET surface area (S BET), pore volume (V p ) and average pore diameter of SA. Figure S3. Sips (a) and Redlich–Peterson (b) adsorption isotherm models fit…
Additional file 1. Correlation matrices for the extracted element concentrations.
Additional file 9: Figure S5. Computation of â Minimal Sampling Depthâ .
Heatmap based on the output from Stacey showing the posterior probability of two specimens belonging to the same species. The probability matrix was calculated from the output of the Stacey analysis (see Methods – Phylogenetic analyses). Colors represent posterior probability values: 0–0.8 – blue, 0.8–0.9 – yellow, 0.…
FASTA sequences of CSL proteins used for the phylogenetic analysis. (PDF 453 kb)
Comparisons were conducted among groups based on different therapeutic strategies and no significant differences were found. Comparison of clinical characteristics between prophylactic chemotherapy group and expectant group was presented in Table S1. Comparison of clinical characteristics between expectant group and h…
Sequence assembly and annotation, and Table S1 - Table S4. Table S1. Summary of sequence assembly and sequence statistics for the transcriptomes of L. danicus and L. aporus. B1000 and B2000 indicate the percentage of bases involved in contigs of at least 1000 bp and 2000 bp, respectively. Table S2. GO classification o…
Additional file 1: Figure S1. T. reesei SP4 is carbon catabolite-repressed. a Growth of T. reesei SP4, QM9414 and RUT-C30 on the medium plate containing both glucose (1.0%) and Avicel (0.5%) as carbon sources. A clear cellulolytic halo was observed around the colony of RUT-C30, but not SP4 and QM9414. b Graphical repr…
Additional file 1. Additional Figures S1â S5.
Synthesis and In vitro Performance of Polypyrrole coated Ironâ Platinum Nanoparticles for Photothermal Therapy and Photoacoustic Imaging. (DOCX 4483Â kb)
Additional file 2: Figure S1. Phylogenetic tree of strain B. subtilis IPE5-4 based on 16S rRNA gene sequences. The phylogenetic tree was constructed by neighbor-joining method using MEGA 5.05 with 1000 bootstraps. The bootstrap percentages were given at branch points. The GenBank accession numbers of 16S rRNA gene fro…
Distribution of GC content, MAKER six HMMs gene predictions and novel genes predicted by the high and low GC HMMs in the Oryza sativa genome. A) Genomic GC content in 300 Mb bins. Warmer colors indicate higher than average GC content while cooler colors indicate lower than average GC content. B) Heatmap visualization…
Additional file1: Text 1. Synthesis of bimetallic compounds. Table S1. Crystal data. Text 2. Single crystal structure descriptions. Text 3. Argentometric titration. Table S2. Idealistic oxidation reactions of two types of compounds, precursors 1, 5 with 2:1 and precursors 8, 9 with 1:1 stoichiometric ratio between Li+…
Additional file 1. Copies of NMR and MS spectra.
Additional file 1: Figure S1. Purification profile of the different cellulosomes by Gel filtration chromatography. C. thermocellum growth media were centrifuged (10,900 g, 7 min), and the supernatant fluids were carefully removed from the pellet and concentrated 40 times using a Pellicon XL biomax 300 cassette (Millip…
Cumulative MB release of (a) NPsmall, (c) NPbig&thin, and (e) NPbig&thick and hour-by-hour MB release profiles of (b) NPsmall, (d) NPbig&thin, and (f) NPbig&thick, from PBS buffer at 37 °C. Figure S2. Silica content of Panc-1 cells presented in percentages after 6, 18, and 24 hrs incubation with cocktail nanoparticles…