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Diverse, High-Quality Test Set for the Validation of Protein−Ligand Docking Performance

Michael J. Hartshorn、Marcel L. Verdonk、Gianni Chessari 等 7 位作者2007-01-19OpenAlex

A procedure for analyzing and classifying publicly available crystal structures has been developed. It has been used to identify high-resolution protein-ligand complexes that can be assessed by reconstructing the electron density for the ligand using the deposited structure factors. The complexes have been clustered a…

Protein Structure and DynamicsComputational Drug Discovery MethodsEnzyme Structure and Function

Crystal Structure, Electronic Structure, and Physical Properties of Ti1-δMo1+δAs4 and Ti1-δMo1+δSb4

Shahab Derakhshan、Abdeljalil Assoud、Katja M. Kleinke 等 4 位作者2007-01-18Inorganic Chemistry

The new ternary pnictides, Ti(1-delta)Mo(1+delta)Pn4 (Pn = As, Sb), were uncovered during our search for novel thermoelectric materials. Both compounds crystallize in the OsGe2 type in the monoclinic space group C2/m, with lattice dimensions of a = 10.1222(9) A, b = 3.6080(3) A, c = 8.1884(8) A, beta = 120.230(2) degr…

Advanced Thermoelectric Materials and DevicesRare-earth and actinide compoundsIron-based superconductors research

High‐molecular‐weight fluorinated aromatic polyformal containing a phthalazinone moiety

Xiuhua Li、Allan S. Hay2007-01-18Journal of Polymer Science Part A Polymer Chemistry

A novel bisphenol containing phthalazinone and perfluorobiphenyl moieties can be converted into a high-molecular-weight polyformal with a glass-transition temperature of 200 °C and excellent thermal stability.

Liquid Crystal Research AdvancementsEpoxy Resin Curing ProcessesSynthesis and properties of polymers

First-Principles Study of Electronic Structure of the Laves Phase ZrFe 2

Zhang Chang-wen、Zhang Zhong、Wang Shao-Qing 等 8 位作者2007-01-18Chinese Physics Letters

We perform the ab initio calculation for obtaining the density of states and magnetic properties of ZrFe 2 Laves phase compound based on the method of augmented plane waves plus local orbital. The results indicate that the ferromagnetic state is more stable than the paramagnetic one, but with a slightly larger volume.…

Rare-earth and actinide compoundsHeusler alloys: electronic and magnetic propertiesInorganic Chemistry and Materials

Formation of Intrinsic Point Defects in Fluorine-doped Synthetic SiO2 Glass by 60Co γ-ray Irradiation

Koichi Kajihara、Masahiro Hirano、Linards Skuja 等 4 位作者2007-01-18Chemistry Letters

Abstract Intrinsic point defect formation in a fluorine-doped synthetic silica (SiO2) glass by 60Co γ-ray irradiation was examined. The most abundantly formed defects are oxygen vacancies (Si–Si bonds). The concentrations of Si–Si bonds and interstitial oxygen molecules increase almost linearly with the γ-ray dose. Th…

Glass properties and applicationsX-ray Spectroscopy and Fluorescence AnalysisIon-surface interactions and analysis

Characterizations of Unsupported and Supported Rhodium−Iron Phosphate Catalysts Effective for Oxidative Carbonylation of Methane

Ye Wang、Qiang Yuan、Qinghong Zhang 等 4 位作者2007-01-18The Journal of Physical Chemistry C

Unsupported and MCM-41-supported Rh-doped FePO 4 catalysts, which are effective for the oxidative carbonylation of methane directly to methyl acetate in the presence of CO and N 2 O, have been characterized by CO TPR in combination with XPS and FTIR spectroscopy of CO chemisorption. The CO TPR studies provide further…

Catalytic Processes in Materials ScienceMesoporous Materials and CatalysisCatalysis and Oxidation Reactions

Flux Growth and Optoelectronic Study of PbWO4 Single Crystals

S. K. Arora、Bhupendra Chudasama2007-01-18Crystal Growth & Design

Lead tungstate (PbWO 4 ) single crystals have been obtained by the flux growth technique using strontium chloride (SrCl 2 ) as flux. Optimum growth conditions are described for obtaining well-faceted transparent crystals. A thermogravimetric study shows that the compound is stable in the temperature range 25−1000 °C.…

Luminescence Properties of Advanced MaterialsAcoustic Wave Resonator TechnologiesOptical and Acousto-Optic Technologies

Transmural communication at a subcellular level may play a critical role in the fallout based‐endothelialization of dacron vascular prostheses in canine

Ze Zhang、Stephen Briana、Yvan Douville 等 5 位作者2007-01-18Journal of Biomedical Materials Research Part A

A microporous and permeable wall is important for the healing of vascular prostheses, however, the significance of its permeability to soluble substances at subcellular level has not been demonstrated. Polyester arterial prostheses were prepared in such a way that each of them contained three segments, of which at lea…

Angiogenesis and VEGF in CancerElectrospun Nanofibers in Biomedical ApplicationsCardiac and Coronary Surgery Techniques

Dendrimer−Tetrachloroplatinate Precursor Interactions. 1. Hydration of Pt(II) Species and PAMAM Outer Pockets

Francisco Tarazona-Vasquez、Perla B. Balbuena2007-01-18The Journal of Physical Chemistry A

Density functional theory is used to investigate the structure and energetics of the tetrachloroplatinate anion and its hydrolysis products at several degrees of hydration, as well as those of outer dendrimer pockets hosting such species. The number of water molecules able to saturate an unprotonated outer dendrimer p…

Gold and Silver Nanoparticles Synthesis and ApplicationsDendrimers and Hyperbranched PolymersFerrocene Chemistry and Applications

The Effect of Axial Ligand on the Reactivity of Oxomanganese(V) Corrole

Haiyang Liu、Hua Zhou、Lanying Liu 等 6 位作者2007-01-18Chemistry Letters

Abstract The effect of axial ligand on the reactivity of oxomanganese(V) 5,10,15-tris(pentafluorophenyl)corrole (tpfc)MnVO had been investigated by kinetic method. It was found the reactivity of (tpfc)MnVO towards styrene could be greatly enhanced by axial coordination interaction. Catalytic experiments indicated that…

Magnetism in coordination complexesPorphyrin and Phthalocyanine ChemistryMetal-Catalyzed Oxygenation Mechanisms

Is the Preadsorbed Sulfur Atom Always Acting as a Poison for the Surface Reaction?

Liqin Xue、Xian‐Yong Pang、Gui‐Chang Wang2007-01-18The Journal of Physical Chemistry C

We have systematically studied the water dissociation on clean, oxygen preadsorbed and sulfur preadsorbed Mo(100), Cu(111), and Au(111) by the DFT-GGA method. The total energy change and the activation energy have been calculated for the direct, the oxygen-assisted, and the sulfur-assisted cleavage of the O−H bonds of…

Electrocatalysts for Energy ConversionCatalytic Processes in Materials ScienceCatalysis and Hydrodesulfurization Studies

Detailed Kinetic Study of the Partial Oxidation of Methane over La2O3 Catalyst. Part 2: Mechanism

Matthieu Fleys、Yves Simon、Paul-Marie Marquaire2007-01-18Industrial & Engineering Chemistry Research

In the first part of this research, a detailed experimental study was conducted for the partial oxidation of methane (POM) over La 2 O 3 . It was shown that the interactions between gas-phase and surface reactions should be considered and that the POM is a homogeneous−heterogeneous reaction. In this second part of the…

Catalytic Processes in Materials ScienceCatalysts for Methane ReformingCatalysis and Oxidation Reactions

Boron nitride fullereneB36N36doped with transition metal atoms: First-principles calculations

Ronaldo J. C. Batista、Mário S. C. Mazzoni、Hélio Chacham2007-01-18Physical Review B

We perform first-principles calculations for the interaction of the transition metal atoms Fe, Co, and W, as well as the FeO molecule, with the boron nitride fullerene ${\mathrm{B}}_{36}{\mathrm{N}}_{36}$. The stable structure of the atom-fullerene complexes may have the dopant atom either at the center of the cage or…

Diamond and Carbon-based Materials ResearchFullerene Chemistry and ApplicationsBoron and Carbon Nanomaterials Research

Neutron Diffraction and Theoretical DFT Studies of Two Dimensional Molecular-Based Magnet K2[Mn(H2O)2]3[Mo(CN)7]2·6H2O

Béatrice Gillon、Antoine Goujon、S. Willemin 等 9 位作者2007-01-18Inorganic Chemistry

Exchange mechanisms and magnetic structure in the two-dimensional cyano-bridged molecule-based magnet K2[Mn(H2O)2]3[Mo(CN)7]2.6H2O have been investigated by a combination of neutron diffraction studies on both single crystal and powder samples and theoretical DFT calculations. The experimental spin density has been de…

Magnetism in coordination complexesOrganic and Molecular Conductors ResearchAdvanced NMR Techniques and Applications

Detailed Kinetic Study of the Partial Oxidation of Methane over La2O3Catalyst. Part 1: Experimental Results

Matthieu Fleys、Wenjuan Shan、Yves Simon 等 4 位作者2007-01-18Industrial & Engineering Chemistry Research

A complete kinetic study of the partial oxidation of methane has been performed in a “catalytic jet-stirred reactor”. The main goal of this study was to elucidate the interactions between gas-phase reactions and surface reactions and to propose a detailed heterogeneous−homogeneous mechanism. The catalyst used in this…

Catalytic Processes in Materials ScienceCatalysts for Methane ReformingCatalysis and Oxidation Reactions

Role of Hydrophobic Clusters in the Stability of α-Helical Coiled Coils and Their Conversion to Amyloid-like β-Sheets

He Dong、Jeffrey D. Hartgerink2007-01-18Biomacromolecules

We designed a library of short peptides using standard rules for coiled-coil assembly. Depending on the composition of amino acids in the non-interacting region of the coiled coil (positions b, c, and f) these peptides are able to convert from alpha-helical to beta-sheet secondary structure. This type of transition is…

Protein Structure and DynamicsAlzheimer's disease research and treatmentsSupramolecular Self-Assembly in Materials

Vibronic Interaction in Metalloporphyrin π-Anion Radicals

Kazunari Yoshizawa、Tomonori Nakayama、Takashi Kamachi 等 4 位作者2007-01-18The Journal of Physical Chemistry A

The vibronic (vibrational-electronic) interactions in the pi-anion radicals of the metalloporphyrins (M=Cr, Mn, Fe, Co, Ni, Cu, and Zn), which show delocalized D4h structures in the neutral states, are discussed using B3LYP density-functional-theory calculations. The B1g and B2g modes of vibration can remove the degen…

Porphyrin and Phthalocyanine ChemistryMolecular Junctions and NanostructuresPhotochemistry and Electron Transfer Studies

Anisotropic diffusion of light in polymer dispersed liquid crystals

Alenka Mertelj、Martin Čopič2007-01-18Physical Review E

Anisotropic diffusion of light was experimentally first observed in bulk nematic liquid crystals. The origin of anisotropy in such a system is due to the optical anisotropy of nematic liquid crystal and to anisotropic scattering of light from nematic orientational fluctuations. In polymer dispersed liquid crystals (PD…

Liquid Crystal Research AdvancementsRandom lasers and scattering mediaOptical Polarization and Ellipsometry

Dendrimer-Tetrachloroplatinate Precursor Interactions. 2. Noncovalent Binding in PAMAM Outer Pockets

Francisco Tarazona-Vasquez、Perla B. Balbuena2007-01-18The Journal of Physical Chemistry A

Density functional theory is used to investigate the complexation ability of dendrimer outer pockets--in both tertiary amine protonated and unprotonated scenarios--toward molecular guests, particularly tetrachloroplatinate(II) and its mono- and diaquated derivatives as well as competing counterions. The effect of the…

Metal complexes synthesis and propertiesDNA and Nucleic Acid ChemistryDendrimers and Hyperbranched Polymers

Mechanisms of the Reactions of W and W+ with NOx (x = 1, 2): A Computational Study

Hsin‐Tsung Chen、Djamaladdin G. Musaev、Stephan Irle 等 4 位作者2007-01-18The Journal of Physical Chemistry A

The mechanisms of the reactions of W and W+ with COx (x=1, 2) were studied at the CCSD(T)/[SDD+6-311G(d)]//B3LYP/[SDD+6-31G(d)] level of theory. It was shown that the gas-phase reaction of W with CO2 proceeds with a negligible barrier via an insertion pathway, W(7S)+CO2(1A1)-->W(eta2-OCO)(6A')-->OW(eta1-CO)(1A)-->WO (…

Advanced Chemical Physics StudiesCatalytic Processes in Materials ScienceIndustrial Gas Emission Control