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PRODRG: a tool for high-throughput crystallography of protein–ligand complexes

Alexander W. Schüttelkopf、Daan M. F. van Aalten2004-07-21OpenAlex

The small-molecule topology generator PRODRG is described, which takes input from existing coordinates or various two-dimensional formats and automatically generates coordinates and molecular topologies suitable for X-ray refinement of protein-ligand complexes. Test results are described for automatic generation of to…

Protein Structure and DynamicsComputational Drug Discovery MethodsEnzyme Structure and Function

Hydrothermal Synthesis Process of Magnesium Oxysulfate Whiskers

Feng Liu、Lan Xiang、Jin Yong2004-07-20Journal of Inorganic Materials

Magnesium oxysulfate whiskers (5Mg(OH)2·MgSO4·3H2O) with a diameter of 0.5-1.0μm and a length of 30-50μm were synthesized via precipitation in room temperature followed with the hydrothermal reaction, using MgSO4 and NaOH as the raw materials. The experimental results indicate that the addition of magnesium hydroxide…

Magnesium Oxide Properties and Applications

Susceptibility of "ultracapacitors" to proton and gamma irradiation

S. Shojah-Adalan、R. Wilkins、H.U. Machado 等 11 位作者2004-07-20OpenAlex

Ultracapacitors are promising components for energy storage, power backup and delivery systems. Our study examines the possible effects associated with gamma and proton irradiation in selected samples up to 1200 farad.

Supercapacitor Materials and FabricationFuel Cells and Related MaterialsElectric and Hybrid Vehicle Technologies

Low Molecular Weight Poly(ethylene glycol) as an Environmentally Benign Solvent for Pharmaceutical Crystallization and Precipitation

Xing Wang、Celia S. Ponder、Donald J. Kirwan2004-07-20Crystal Growth & Design

Low molecular weight poly(ethylene glycol) (PEG300) is examined as a possible environmentally benign replacement solvent for volatile organic solvents commonly used in crystallization and precipitation operations in pharmaceutical processing. It is shown to have solvating power comparable in magnitude to that of 2-pro…

Drug Solubulity and Delivery SystemsAnalytical Chemistry and ChromatographyCrystallization and Solubility Studies

Interlamellar Silylation of Montmorillonite with 3-Aminopropyltriethoxysilane

Kyeong-Won Park2004-07-20Bulletin of the Korean Chemical Society

H-montmorillonite was modified by interlayer surface silylation using 3-aminopropyltriethoxysilane and dodecylamine in ethanol without a pre-swelling step. Dodecylamine acts as a gallery expander and silylation catalyst. The evaporation of ethanol from the dispersion yields well-ordered silylated montmorillonites with…

Mesoporous Materials and CatalysisPorphyrin and Phthalocyanine ChemistryClay minerals and soil interactions

Theory ofMnsupersaturation inSiandGe

Xuan Luo、Shengbai Zhang、Su‐Huai Wei2004-07-20Physical Review B

Using first-principles total-energy methods, we calculate the formation energy for typical $\mathrm{Mn}$ defects in bulk $\mathrm{Si}$ and $\mathrm{Ge}$ and on (001) surfaces, from which the various $\mathrm{Mn}$ solubility limits are derived. Applying the theory for ultrahigh doping in semiconductors, we can understa…

ZnO doping and propertiesSemiconductor materials and devicesCopper-based nanomaterials and applications

Metallic Nanoparticle Production Utilizing a Supercritical Carbon Dioxide Flow Process

Michael C. McLeod、William F. Gale、Christopher B. Roberts2004-07-20Langmuir

Metallic nanoparticles of palladium and silver ranging in size from 1 to 15 nm were produced entirely within carbon dioxide by spraying a carbon dioxide carrier solution containing CO2-soluble metal precursors into a CO2 receiving solution containing a reducing agent (NaBH(OAc)3 or H2) and fluorocarbon thiol stabilizi…

Catalytic Processes in Materials SciencePhase Equilibria and ThermodynamicsCatalysis and Oxidation Reactions

Synthesis, Structure, and Magnetic Properties of a Large Lanthanide–Transition‐Metal Single‐Molecule Magnet

Curtis M. Zaleski、Ezra C. Depperman、Jeff W. Kampf 等 5 位作者2004-07-20Angewandte Chemie

Der größte bekannte Dy-Mn-Komplex ist [DyIII6MnIII4MnIV2(H2shi)4(Hshi)2(shi)10] (H3shi=Salicylhydroxamsäure; siehe Stereobild). Die Dysprosiumionen bilden einen nahezu planaren Sechsring, wobei zwei von ihnen durch MnIII2MnIV-Trimere überdacht sind. Diese Topologie bietet eine neue Strukturklasse, an der interessante…

Magnetism in coordination complexesLanthanide and Transition Metal ComplexesAdvanced NMR Techniques and Applications

Molecular Structure and Thermochemistry of Tin Dibromide Monomers and Dimers. A Computational and Electron Diffraction Study

Mária Kolonits、Balázs Réffy、Gábor Jancsó 等 4 位作者2004-07-20The Journal of Physical Chemistry A

The molecular structure of tin dibromide was investigated by high-level computational methods and gas-phase electron diffraction. The structural and vibrational characteristics of both SnBr 2 and Sn 2 Br 4 were determined by computations. To reach an agreement between computed and experimental bond lengths for SnBr 2,…

Intermetallics and Advanced Alloy PropertiesThermal and Kinetic AnalysisChemical Thermodynamics and Molecular Structure

Use of Coupled Rate Equations To Describe Nucleation-and-Branching Rate-Limited Solid-State Processes

Peter J. Skrdla2004-07-20The Journal of Physical Chemistry A

The kinetics of “nucleation-and-branching” rate-limited solid-state reactions and phase transformations (which include processes that are governed by nucleation and nuclei multiplication but not nuclei growth or crystal growth) are described using coupled rate equations. We treat such processes as occurring in two ste…

Crystallization and Solubility StudiesThermal and Kinetic AnalysisChemical Thermodynamics and Molecular Structure

Impact of Electronic Asymmetry on Photoexcited Triplet-State Spin Distributions in Conjugated Porphyrin Oligomers Probed via EPR Spectroscopy

Paul J. Angiolillo、H. Tetsuo Uyeda、Timothy V. Duncan 等 4 位作者2004-07-20The Journal of Physical Chemistry B

The photophysics of triplet excitons in a series of electronically asymmetric “push−pull” π-conjugated meso -to- meso ethyne-bridged (porphinato)metal oligomers, along with electronically symmetric analogues, were studied by X-band electron paramagnetic resonance (EPR) spectroscopy under continuous-wave (CW) optical p…

Organic Electronics and PhotovoltaicsPorphyrin and Phthalocyanine ChemistryMolecular Junctions and Nanostructures

Developing a virtual reality application for training nuclear power plant operators: setting up a database containing dose rates in the refuelling plant

J. Ródenas2004-07-20Radiation Protection Dosimetry

Operators in Nuclear Power Plants can receive high doses during refuelling operations. A training programme for simulating refuelling operations will be useful in reducing the doses received by workers as well as minimising operation time. With this goal in mind, a virtual reality application is developed within the f…

Radioactive contamination and transferGraphite, nuclear technology, radiation studiesNuclear and radioactivity studies

Switchable Electron‐Transfer Processes in a Mixed‐Valence, Kinetically Locked, Trinuclear RuII Metallamacrocycle

N. Shan、Steven J. Vickers、Harry Adams 等 5 位作者2004-07-20Angewandte Chemie International Edition

A valence-mixing bowl: A kinetically locked, trinuclear RuII metallamacrocycle 1 has been synthesized (see picture). Electrochemical and photophysical studies reveal that this complex undergoes three separate, fully reversible oxidations. Of the four accessible redox states, two are mixed-valence (one of which is vale…

Supramolecular Chemistry and ComplexesMagnetism in coordination complexesPorphyrin and Phthalocyanine Chemistry

Self-Recognition in the Coordination Driven Self-Assembly of 2-D Polygons

Chris Addicott、Neeladri Das、Peter J. Stang2004-07-20Inorganic Chemistry

Self-recognition in the transition-metal-mediated self-assembly of some 2-D polygons is presented. Prolonged heating of two or three organoplatinum reagents with 4,4'-dipyridyl in aqueous acetone results in the predominant formation of a rectangle, triangle, and/or square. All mixtures are characterized with NMR and e…

Advanced Polymer Synthesis and CharacterizationSupramolecular Self-Assembly in MaterialsModular Robots and Swarm Intelligence

Fibre-optic thermometer using sensor materials with long fluorescence lifetime

Hiroaki Aizawa、Hiroaki Uchiyama、T. Katsumata 等 7 位作者2004-07-20Measurement Science and Technology

A fibre-optic thermometer using newly developed phosphor sensor materials is described. A highly sensitive fibre-optic fluorescence thermometer is developed using chromium ion (Cr 3+ ) doped phosphor crystals with a longer lifetime than that of conventional ruby sensors. Long fluorescent europium doped strontium alumi…

Luminescence Properties of Advanced MaterialsPerovskite Materials and ApplicationsGas Sensing Nanomaterials and Sensors

Bending Rigidity of Interfaces in Aqueous Phase-Separated Biopolymer Mixtures

Elke Scholten、Leonard M.C. Sagis、Erik van der Linden2004-07-20The Journal of Physical Chemistry B

Using equations for the interfacial properties for a two-phase multicomponent system, we present a new model for the interfacial tension and bending rigidity for liquid−liquid interfaces between semidilute polymer phases. Using this model, we calculate the interfacial thickness and the bending rigidity for two differe…

Proteins in Food SystemsSurfactants and Colloidal SystemsPickering emulsions and particle stabilization

Electronic structure and optical properties of silicon nanowires: A study using x-ray excited optical luminescence and x-ray emission spectroscopy

T. K. Sham、S. J. Naftel、P.-S. G. Kim 等 10 位作者2004-07-20Physical Review B

We report a soft x-ray excited optical luminescence (XEOL) and x-ray emission spectroscopy (XES) study of silicon nanowires (SiNW) with excitations at the silicon $K$ and ${L}_{3,2}$ edge, respectively. It is found that the XEOL of SiNW exhibits several luminescence bands at $\ensuremath{\sim}460$, $\ensuremath{\sim}5…

Semiconductor materials and devicesSilicon Nanostructures and PhotoluminescenceNanowire Synthesis and Applications

A Large Thermal Hysteresis Loop Produced by a Charge-Transfer Phase Transition in a Rubidium Manganese Hexacyanoferrate

Hiroko Tokoro、Shin‐ichi Ohkoshi、Tomoyuki Matsuda 等 4 位作者2004-07-20Inorganic Chemistry

In a rubidium manganese hexacyanoferrate, RbMn[Fe(CN)(6)], the magnetic susceptibility (chi(M)) decreased at 225 K (=T(1/2)decreasing) and abruptly increased at 300 K (=T(1/2)increasing) in the cooling and warming processes, respectively. X-ray photoelectron spectroscopy and infrared spectroscopy indicated that the hi…

Magnetism in coordination complexesLanthanide and Transition Metal ComplexesAdvanced NMR Techniques and Applications

Inelastic neutron scattering in random binary alloys : an augmented space approach

Aftab Alam、Abhijit Mookerjee2004-07-20arXiv

Combining the augmented space representation for phonons with a generalized version of Yonezawa-Matsubara diagrammatic technique, we have set up a formalism to seperate the coherent and incoherent part of the total intensity of thermal neutron scattering from disordered alloys. This is done exacly without taking any r…

Materials Science