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Apo Adenylate Kinase Encodes Its Holo Form: A Principal Component and Varimax Analysis

Robert I. Cukier2009-01-21The Journal of Physical Chemistry B

Adenylate kinase undergoes large-scale motions of its LID and AMP-binding (AMPbd) domains when its apo, open form closes over its substrates, AMP and Mg2+-ATP. It may be an example of an enzyme that provides an ensemble of conformations in its apo state from which its substrates can select and bind to produce catalyti…

Protein Structure and DynamicsBacterial Genetics and BiotechnologyEnzyme Structure and Function

Zinc hydroxystannate‐coated metal hydroxides as flame retardant and smoke suppression for flexible poly vinyl chloride

Hongqiang Qu、Weihong Wu、Jixing Xie 等 4 位作者2009-01-21Fire and Materials

Abstract Zinc hydroxystannate (ZHS)‐coated metal hydroxides were prepared. The effects of ZHS‐coated metal hydroxides on flame retardancy and smoke suppression of flexible poly vinyl chloride were studied by means of the limiting oxygen index, smoke density rating and the char yield test. The mechanism was investigate…

Polymer Nanocomposites and PropertiesFlame retardant materials and propertiesPolymer Science and PVC

Nanocomposite Films Obtained by Electrochemical Codeposition of Conducting Polymers and Carbon Nanotubes

Viorel Brânzoi、Luisa Pilan、Florina Brânzoi2009-01-21Electroanalysis

Abstract The electrochemical growth of carbon nanotubes (CNTs) – conducting polymer composites offers the ability to produce three‐dimensional nanostructured films that combine the redox pseudo‐capacitive charge storage mechanism of conducting polymers with the high surface area and conductivity of CNTs [1–3]. In this…

Electrochemical sensors and biosensorsConducting polymers and applicationsElectrochemical Analysis and Applications

Unusual Crystallization Kinetics in a Hard Sphere Colloid-Polymer Mixture

Thomas Palberg、Andreas Stipp、E. Bartsch2009-01-21Physical Review Letters

We investigated the crystallization kinetics of a hard sphere colloid-polymer mixture at conditions where about 95% of solid coexists with about 5% of fluid. From time resolved Bragg and small angle light scattering, we find that the crystallite size increases with a power law of exponent alpha approximately 1/3 durin…

Phase Equilibria and ThermodynamicsMaterial Dynamics and Propertiesnanoparticles nucleation surface interactions

Reconstruction of Pt13 Clusters into Pt2(CO)m on CO Addition in NaY Zeolite

Yaşar Akdoğan、Sankaran Anantharaman、Xiong Liu 等 6 位作者2009-01-21The Journal of Physical Chemistry C

Pt 13 clusters with extraordinarily high magnetization are interesting samples in the area of CO chemistry. For the first time paramagnetic platinum carbonyl samples were prepared and characterized by electron paramagnetic resonance (EPR) spectroscopy to improve the understanding of the CO adsorption effect on the str…

Advanced Chemical Physics StudiesCatalytic Processes in Materials ScienceCatalysis and Oxidation Reactions

Martensitic transformation in Ni50.4Mn34.9In14.7melt spun ribbons

J.L. Sánchez Llamazares、B. Hernando、Carlos García 等 6 位作者2009-01-21Journal of Physics D Applied Physics

Single phase microcrystalline ribbon flakes with the average elemental composition Ni 50.4 Mn 34.9 In 14.7 were produced by rapid quenching using melt spinning technique. Fracture cross section micrographs of ribbons show the formation of a columnar-like microstructure, with the longer axis of grains aligned perpendic…

Shape Memory Alloy TransformationsMagnetic Properties and ApplicationsMagnetic Properties of Alloys

Characterization of anisotropic nano-particles by using depolarized dynamic light scattering in the near field

Doriano Brogioli、Domenico Salerno、Valeria Cassina 等 7 位作者2009-01-21Optics Express

Light scattering techniques are widely used in many fields of condensed and soft matter physics. Usually these methods are based on the study of the scattered light in the far field. Recently, a new family of near field detection schemes has been developed, mainly for the study of small angle light scattering. These t…

Material Dynamics and PropertiesOptical Imaging and Spectroscopy TechniquesExperimental and Theoretical Physics Studies

Nanofibrilar Polyaniline: Direct Route to Carbon Nanotube Water Dispersions of High Concentration

Pablo Jiménez、Wolfgang K. Maser、Pere Castell 等 5 位作者2009-01-21Macromolecular Rapid Communications

Water dispersible nanofibrilar polyaniline (NF-PANI) provides a novel and direct route towards carbon nanotube water dispersions of high concentration. Carrying out the chemical synthesis of NF-PANI in the presence of carbon nanotubes (CNTs) results in an entirely nanostructured nanofibrilar polyaniline/carbon nanotub…

Supercapacitor Materials and FabricationAdvanced Sensor and Energy Harvesting MaterialsConducting polymers and applications

Residual structure within the disordered C‐terminal segment of p21Waf1/Cip1/Sdi1 and its implications for molecular recognition

Mi‐Kyung Yoon、Veena Venkatachalam、Austin Huang 等 6 位作者2009-01-21Protein Science

Probably the most unusual class of proteins in nature is the intrinsically unstructured proteins (IUPs), because they are not structured yet play essential roles in protein-protein signaling. Many IUPs can bind different proteins, and in many cases, adopt different bound conformations. The p21 protein is a small IUP (…

Protein Structure and DynamicsRNA and protein synthesis mechanismsEnzyme Structure and Function

Numerical Investigations into the Tensile Behavior of TiO2 Nanowires: Structural Deformation, Mechanical Properties, and Size Effects

L. Dai、Chorng Haur Sow、Chwee Teck Lim 等 5 位作者2009-01-21Nano Letters

The mechanisms governing the tensile behavior of TiO(2) nanowires were studied by molecular dynamics simulations. Nanowires below a threshold diameter of about 10 A transformed into a completely disordered structure after thermodynamic equilibration, whereas thicker nanowires retained their crystalline core. Initial e…

TiO2 Photocatalysis and Solar CellsZnO doping and propertiesElectronic and Structural Properties of Oxides

Imaging Gold Nanorods by Plasmon-Resonance-Enhanced Four Wave Mixing

Yookyung Jung、Hongtao Chen、Ling Tong 等 4 位作者2009-01-21The Journal of Physical Chemistry C

The current work investigates the four-wave mixing (FWM) signal from gold nanorods (NRs) using two synchronized lasers and its potential applications in bioimaging. Using the lightning rod model, we show that the strongest FWM occurs when the pump laser wavelength is tuned to be resonant with the longitudinal plasmon…

Gold and Silver Nanoparticles Synthesis and ApplicationsSpectroscopy Techniques in Biomedical and Chemical ResearchProtein Interaction Studies and Fluorescence Analysis

Ab Initio Investigation of Dissolution Mechanisms in Aluminosilicate Minerals

Christin P. Morrow、Shikha Nangia、Barbara J. Garrison2009-01-21The Journal of Physical Chemistry A

The reactions of aluminosilicate clusters with water are investigated using ab initio calculations. There are several reaction sites on a mineral surface, and, in the case of aluminosilicates, the dissolution chemistry is dictated by chemically distinct surface termination sites: Al and Si. Environmental factors such…

Zeolite Catalysis and SynthesisGlass properties and applicationsClay minerals and soil interactions

Molar volume minimum and adaptative rigid networks in relationship with the intermediate phase in glasses

Christine Bourgel、M. Micoulaut、M. Malki 等 4 位作者2009-01-21Physical Review B

We propose that the molar volume minimum observed in barium silicate glasses $(1\ensuremath{-}x){\text{SiO}}_{2}\ensuremath{-}x\text{BaO}$ is related to the onset of an adaptative rigid glassy network. We obtain in the compositional window $29%<x<33%$ a dramatic decrease in stressed rigid local units from the Ra…

Material Dynamics and PropertiesGlass properties and applicationsPhase-change materials and chalcogenides

Effect of poly(butylene succinate) crystals on spherulitic growth of poly(ethylene oxide) in binary blends of the two substances

Takayuki Ikehara、Hideo Kurihara、Toshiyuki Kataoka2009-01-21Journal of Polymer Science Part B Polymer Physics

Abstract The effects of the lamellar growth direction, extinction rings, and spherulitic boundaries of poly(butylene succinate) (PBSU) on the spherulitic growth of poly(ethylene oxide) (PEO) were investigated in miscible blends of the two crystalline polymers. In the crystallization process from a homogeneous melt, PB…

Polymer crystallization and propertiesPolymer Nanocomposites and Propertiesbiodegradable polymer synthesis and properties

Synthesis of Monodisperse Nanocrystals via Microreaction: Open-to-Air Synthesis with Oleylamine as a Coligand

Hongwei Yang、Ningning Fan、Weiling Luan 等 4 位作者2009-01-21Nanoscale Research Letters

Microreaction provides a controllable tool to synthesize CdSe nanocrystals (NCs) in an accelerated fashion. However, the surface traps created during the fast growth usually result in low photoluminescence (PL) efficiency for the formed products. Herein, the reproducible synthesis of highly luminescent CdSe NCs direct…

Gold and Silver Nanoparticles Synthesis and ApplicationsQuantum Dots Synthesis And PropertiesChalcogenide Semiconductor Thin Films

Do Anionic Gold Clusters Modify Conventional Hydrogen Bonds? The Interaction of Anionic Aun (n = 2−4) with the Adenine−Uracil Base Pair

Ana Martı́nez2009-01-21The Journal of Physical Chemistry A

Density functional approximation (B3LYP) calculations have been used in order to analyze the interaction of gold anionic clusters (Au(n) with n = 2-4) with uracil ([uracil-Au(n)](-1)), adenine ([adenine-Au(n)](-1)), and the adenine-uracil base pair ([uracil-adenine-Au(n)](-1)). It was found that there is only one stab…

Metal complexes synthesis and propertiesMolecular Junctions and NanostructuresNanocluster Synthesis and Applications

Optical Degradation of CdSe/ZnS Quantum Dots upon Gamma-Ray Irradiation

Robert Z. Stodilka、Jeffrey J. L. Carson、Kui Yu 等 6 位作者2009-01-21The Journal of Physical Chemistry C

We report quantitative changes to the fluorescent characteristics of quantum dots (QDs) following gamma irradiation. One CdSe/ZnS QD ensemble synthesized via a wet-chemistry approach was dispersed in hexane. Six identical dispersions were prepared, three of which were unexposed controls, whereas the other three were i…

Advanced biosensing and bioanalysis techniquesQuantum Dots Synthesis And PropertiesCarbon and Quantum Dots Applications

Adsorption of Ionic Peptides on Inorganic Supports

Susanna Monti、Michele Alderighi、Celia Duce 等 5 位作者2009-01-21The Journal of Physical Chemistry C

Molecular dynamics (MD) simulations were performed to investigate the adsorption mode of a short three-residue peptide, namely H-Lys-Glu-Lys-NH 2, having only hydrophilic amino acids with alternating negative and positive charges, on titanium dioxide, muscovite mica, and graphite surfaces and to characterize its confo…

Calcium Carbonate Crystallization and InhibitionMinerals Flotation and Separation TechniquesDiatoms and Algae Research

Reaction Mechanism of the Dinuclear Zinc Enzyme N-Acyl-l-homoserine Lactone Hydrolase: A Quantum Chemical Study

Rong‐Zhen Liao、Jianguo Yu、Fahmi Himo2009-01-21Inorganic Chemistry

N-acyl-L-homoserine lactone hydrolase (AHL lactonase) is a dinuclear zinc enzyme responsible for the hydrolytic ring opening of AHLs, disrupting quorum sensing in bacteria. The reaction mechanism is investigated using hybrid density functional theory. A model of the active site is designed on the basis of the X-ray cr…

Protein Structure and DynamicsEnzyme Structure and FunctionPorphyrin Metabolism and Disorders

Fabrication of carbon fibers with nanoporous morphologies from electrospun polyacrylonitrile/poly(L‐lactide) blends

Liwen Ji、Andrew J. Medford、Xiangwu Zhang2009-01-21Journal of Polymer Science Part B Polymer Physics

Abstract Porous carbon nanofibers were prepared through electrospinning a blend solution of polyacrylonitrile and poly( L ‐lactide), followed by carbonization at different temperatures and in different atmospheres. Structural features of these porous carbon nanofibers were characterized using scanning electron microsc…

Supercapacitor Materials and FabricationElectrospun Nanofibers in Biomedical ApplicationsFiber-reinforced polymer composites